Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829621.1_cds_XP_016503819.1_17326
CDS Infomation

[gene=LOC107821876] [db_xref=GeneID:107821876] [protein=ketol-acid reductoisomerase, chloroplastic-like] [protein_id=XP_016503819.1] [location=join(3672..3968,4148..4240,5228..5293,5449..5589,6163..6390,6479..6596,6668..6807,6921..7088,7641..7796,8181..8540)] [gbkey=CDS]
Sequence

ATGGCGGCAGCGGCGGCGGCTACTTCATTCTCCATCTCCACTTCCACATCATCATCATCA
TCCAAATCCCTAAAACCCGCCCTTGCCGGTAACTTAGGGTTCCTTTCCACCTCAACTCCG
TTGCTTAAGCCTCTCAGAGCCAAATCCGCCGTTTCATGCGGCAGCAGCTCCAGCTCCGGC
GCGGCTCTCGACGCTCGCATGGTCTCTGCACCTGCTGCCGTCAAAGCCCCTGTTTCTCTC
GATTTTGAAACCTCCGTCTTTAAGAAGGAGAAAATCACCCTTGCTGGCCATGATGAGTAC
ATTGTGAGAGGAGGGAGAGATTTGTTCAAGTATTTGCCGGATGCTTTCAAAGGAGTCAAG
CAGATTGGAGTCATCGGCTGGGGTTCTCAGGGACCTGCTCAAGCCCAGAACTTGAGGGAT
TCTCTCGCTGAAGCAAAATCAGATATAGTCGTTAAGATTGGTTTAAGAAAGGGTTCAAGC
TCCTTTGCAGAGGCCCGTGCAGCTGGGTTTTCTGAAGAGAATGGGACCCTTGGTGACATA
TATGAGACCATCTCTGGCAGTGATCTCGTGCTGCTTTTGATTTCTGATGCTGCTCAGGCT
GATAATTATGAGCAAGTGTTTTCTCACATGAAGCCAAATAGCATACTTGGGCTTTCACAT
GGATTCCTCCTTGGCCATTTGCAGTCAATGGGCCTTGACTTCCCGAAGAACATTAGTGTG
ATTGCTGTATGTCCCAAGGGAATGGGTCCTTCAGTAAGGAGATTATATGTTCAAGGAAAA
GAAATCAATGGTGCTGGAATTAATGCAAGTTTTGCAGTTCACCAGGATATTGATGGAAGG
GCCACAGATGTTGCTCTTGGATGGTCTGTTGCCCTTGGTTCTCCCTTTACTTTTGCTACT
ACTCTAGAACAGGAATATAAAAGTGACATTTTTGGAGAACGAGGTATTTTACTTGGTGCT
GTCCATGGAGTTGTTGAGTCACTTTTCAGAAGGTTCACTGAGAATGGAATGAACGATGAG
CTTGCATACAAGAATACTGTAGAGTGCATAACAGGAATTATTTCAAAGACCATATCAACA
AAGGGCATGTTGGCCGTGTACAACTCATTGACTGAGGAGGGCAAGAAGGAGTTTGAGGCT
GCATACAGTGCTTCATATTACCCCTGCATGGAGATATTGTATGAGTGCTATGAAGATGTA
GCTACAGGTAGTGAGATCAGGAGTGTTGTCTTAGCTGGCCGTCGCTTTTATGAAAAGGAA
GGCTTACCAGCTTTCCCAATGGGGAAAATTGACCAAACAAGGATGTGGAAGGTTGGTGAG
CGCGTTCGAGCAAAACGACCAGCTGGTGATCTTGGTCCTATGTATCCTTTCACTGCTGGT
GTCTTTGTGGCATTGATGATGGCCCAGATTGAGATTCTAAGGAAGAAAGGCCACTCTTAC
TCAGAGATCATAAATGAAAGTGTCATTGAGTCTGTAGATTCTCTCAACCCGTTCATGCAC
GCTCGTGGAGTGTCATTCATGGTTGACAATTGCTCTACAACAGCGCGTTTAGGATCCAGG
AAGTGGGCCCCTCGATTTGATTACATTCTCACCCAGCAAGCACTTGTTGCGGTGGACAAT
AATGCTGCTATCAATTGGGATCTTATCAGCAACTTCCTATCAGATCCGATACACGGAGCT
ATTGAAGTGTGTGCTCAACTGAGACCCACCGTTGATATTTCTGTCACAGCTGATGCTGAT
TTTGTTCGCCCTGAGCTCAGGCAATAA

Peptide Sequence

PEP ID

XP_016503819.1
PEP Infomation

PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAAAAATSFSISTSTSSSSSKSLKPALAGNLGFLSTSTPLLKPLRAKSAVSCGSSSSSG
AALDARMVSAPAAVKAPVSLDFETSVFKKEKITLAGHDEYIVRGGRDLFKYLPDAFKGVK
QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFAEARAAGFSEENGTLGDI
YETISGSDLVLLLISDAAQADNYEQVFSHMKPNSILGLSHGFLLGHLQSMGLDFPKNISV
IAVCPKGMGPSVRRLYVQGKEINGAGINASFAVHQDIDGRATDVALGWSVALGSPFTFAT
TLEQEYKSDIFGERGILLGAVHGVVESLFRRFTENGMNDELAYKNTVECITGIISKTIST
KGMLAVYNSLTEEGKKEFEAAYSASYYPCMEILYECYEDVATGSEIRSVVLAGRRFYEKE
GLPAFPMGKIDQTRMWKVGERVRAKRPAGDLGPMYPFTAGVFVALMMAQIEILRKKGHSY
SEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDN
NAAINWDLISNFLSDPIHGAIEVCAQLRPTVDISVTADADFVRPELRQ

Transcript Sequence

Gene sequence data has not been registered.